# Nudged elastic band calculations accelerated with Gaussian process   regression

**Authors:** Olli-Pekka Koistinen, Freyja B. Dagbjartsd\'ottir, Vilhj\'almur, \'Asgeirsson, Aki Vehtari, Hannes J\'onsson

arXiv: 1706.04606 · 2017-09-22

## TL;DR

This paper introduces a Gaussian process regression method to significantly accelerate nudged elastic band calculations of transition paths, reducing computational effort and improving efficiency in energy and force evaluations.

## Contribution

The authors develop a Gaussian process-based approach that reduces the number of energy and force evaluations needed for nudged elastic band calculations by an order of magnitude.

## Key findings

- Achieved a tenfold reduction in energy evaluations.
- Improved convergence stability with precomputed Hessians.
- Reduced total evaluations by half using uncertainty-guided focus.

## Abstract

Minimum energy paths for transitions such as atomic and/or spin rearrangements in thermalized systems are the transition paths of largest statistical weight. Such paths are frequently calculated using the nudged elastic band method, where an initial path is iteratively shifted to the nearest minimum energy path. The computational effort can be large, especially when ab initio or electron density functional calculations are used to evaluate the energy and atomic forces. Here, we show how the number of such evaluations can be reduced by an order of magnitude using a Gaussian process regression approach where an approximate energy surface is generated and refined in each iteration. When the goal is to evaluate the transition rate within harmonic transition state theory, the evaluation of the Hessian matrix at the initial and final state minima can be carried out beforehand and used as input in the minimum energy path calculation, thereby improving stability and reducing the number of iterations needed for convergence. A Gaussian process model also provides an uncertainty estimate for the approximate energy surface, and this can be used to focus the calculations on the lesser-known part of the path, thereby reducing the number of needed energy and force evaluations to a half in the present calculations. The methodology is illustrated using the two-dimensional M\"uller-Brown potential surface and performance assessed on an established benchmark involving 13 rearrangement transitions of a heptamer island on a solid surface.

## Full text

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## Figures

9 figures with captions in the complete paper: https://tomesphere.com/paper/1706.04606/full.md

## References

42 references — full list in the complete paper: https://tomesphere.com/paper/1706.04606/full.md

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Source: https://tomesphere.com/paper/1706.04606