# Nonequilibrium interactions between ideal polymers and a repulsive   surface

**Authors:** Raz Halifa Levi, Yacov Kantor

arXiv: 1704.08056 · 2017-08-30

## TL;DR

This study investigates the non-equilibrium behavior of ideal polymers near a repulsive surface under external dragging, revealing a critical velocity that influences the feasibility of free energy reconstruction using Jarzynski equality.

## Contribution

It introduces the concept of a critical velocity for polymers near surfaces, analytically and numerically analyzing its impact on work distribution and free energy estimation.

## Key findings

- Existence of a critical velocity $v_c(N)$ for polymer manipulation.
- Work distribution approaches a limiting shape for large $N$.
- Analytical and numerical evidence for $v_c$ in different scenarios.

## Abstract

We use Newtonian and overdamped Langevin dynamics to study long flexible polymers dragged by an external force at a constant velocity $v$. The work $W$ by that force depends on the initial state of the polymer and the details of the process. Jarzynski equality can be used to relate the non-equilibrium work distribution $P(W)$ obtained from repeated experiments to equilibrium free energy difference $\Delta F$ between the initial and final states. We use the power law dependence of the geometrical and dynamical characteristics of the polymer on the number of monomers $N$ to suggest the existence of a critical velocity $v_c(N)$, such that for $v<v_c$ the reconstruction of $\Delta F$ is an easy task, while for $v$ significantly exceeding $v_c$ it becomes practically impossible. We demonstrate the existence of such $v_c$ analytically for ideal polymer in free space and numerically for a polymer being dragged away from a repulsive wall. Our results suggest that the distribution of the dissipated work $W_{\rm d}=W-\Delta F$ in properly scaled variables approaches a limiting shape for large $N$.

## Full text

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## Figures

12 figures with captions in the complete paper: https://tomesphere.com/paper/1704.08056/full.md

## References

39 references — full list in the complete paper: https://tomesphere.com/paper/1704.08056/full.md

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Source: https://tomesphere.com/paper/1704.08056