Property-driven State-Space Coarsening for Continuous Time Markov Chains
Michalis Michaelides (1), Dimitrios Milios (1), Jane Hillston (1) and, Guido Sanguinetti (1, 2) ((1) School of Informatics, University of, Edinburgh, (2) SynthSys, Centre for Synthetic, Systems Biology, University, of Edinburgh)

TL;DR
This paper introduces a novel state-space coarsening method for continuous-time Markov chains that preserves logical trajectory properties, enabling more efficient analysis and visualization of complex dynamical systems.
Contribution
It presents a property-driven coarsening technique using Gaussian Processes and Multi-Dimensional Scaling, focusing on preserving trajectory behaviors rather than just transition similarities.
Findings
Effective low-dimensional visualizations of state-space.
Coherent macro-states with respect to specifications.
High computational efficiency demonstrated.
Abstract
Dynamical systems with large state-spaces are often expensive to thoroughly explore experimentally. Coarse-graining methods aim to define simpler systems which are more amenable to analysis and exploration; most current methods, however, focus on a priori state aggregation based on similarities in transition rates, which is not necessarily reflected in similar behaviours at the level of trajectories. We propose a way to coarsen the state-space of a system which optimally preserves the satisfaction of a set of logical specifications about the system's trajectories. Our approach is based on Gaussian Process emulation and Multi-Dimensional Scaling, a dimensionality reduction technique which optimally preserves distances in non-Euclidean spaces. We show how to obtain low-dimensional visualisations of the system's state-space from the perspective of properties' satisfaction, and how to…
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