Variational Pseudolikelihood for Regularized Ising Inference
Charles K. Fisher

TL;DR
This paper introduces a variational method for efficient and accurate maximum pseudolikelihood inference in the Ising model, improving out-of-sample correlation predictions over existing methods.
Contribution
It presents a novel variational algorithm that regularizes the inference by shrinking couplings, enhancing computational efficiency and predictive accuracy.
Findings
Better out-of-sample correlation prediction than existing methods
More computationally efficient inference algorithm
Successfully modeled letter samples from different fonts
Abstract
I propose a variational approach to maximum pseudolikelihood inference of the Ising model. The variational algorithm is more computationally efficient, and does a better job predicting out-of-sample correlations than regularized maximum pseudolikelihood inference as well as mean field and isolated spin pair approximations with pseudocount regularization. The key to the approach is a variational energy that regularizes the inference problem by shrinking the couplings towards zero, while still allowing some large couplings to explain strong correlations. The utility of the variational pseudolikelihood approach is illustrated by training an Ising model to represent the letters A-J using samples of letters from different computer fonts.
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Taxonomy
TopicsGaussian Processes and Bayesian Inference · Protein Structure and Dynamics · Markov Chains and Monte Carlo Methods
