Generalized Sphere Packing Bound
Arman Fazeli, Alexander Vardy, and Eitan Yaakobi

TL;DR
This paper generalizes the sphere packing bound for deletion-correcting codes using hypergraph theory, providing a linear programming framework and automorphism-based simplifications to compute bounds for various error channels.
Contribution
It introduces the generalized sphere packing bound applicable to regular symmetric error channels and develops automorphism techniques to simplify bound computations.
Findings
Exact bounds for Z channel and single-error cases
Improved upper bounds for deletion and grain-error channels
Application of the method to projective spaces
Abstract
Kulkarni and Kiyavash recently introduced a new method to establish upper bounds on the size of deletion-correcting codes. This method is based upon tools from hypergraph theory. The deletion channel is represented by a hypergraph whose edges are the deletion balls (or spheres), so that a deletion-correcting code becomes a matching in this hypergraph. Consequently, a bound on the size of such a code can be obtained from bounds on the matching number of a hypergraph. Classical results in hypergraph theory are then invoked to compute an upper bound on the matching number as a solution to a linear-programming problem. The method by Kulkarni and Kiyavash can be applied not only for the deletion channel but also for other error channels. This paper studies this method in its most general setup. First, it is shown that if the error channel is regular and symmetric then this upper bound…
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Taxonomy
TopicsDNA and Biological Computing · Coding theory and cryptography · Advanced biosensing and bioanalysis techniques
