An energetic model for macromolecules unraveling
Domenico De Tommasi, Nicola Millardi, Giuseppe Puglisi, and Giuseppe, Saccomandi

TL;DR
This paper introduces an analytical energetic model for macromolecule unfolding, capturing the interplay of entropic and unfolding energies, and successfully reproduces experimental AFM data on titin proteins.
Contribution
It presents a novel, fully analytical model based on energy minimization for understanding macromolecule unfolding processes.
Findings
Model accurately reproduces titin AFM experimental data
Analytical approach clarifies energetic contributions to unfolding
Demonstrates the model's quantitative predictive capability
Abstract
We propose a simple approach, based on the minimization of the total (entropic plus unfolding) energy of a two-state system, describing the stretch-induced unfolding of macromolecules (proteins, silks, nanopolymers, DNA/RNA). The model is fully analytical and enlightens the role of the different energetic components regulating the unfolding evolution. As an explicit example of application we compare the analytical results with the titin Atomic Force Microscopy experiments showing the ability of the model to quantitatively reproduce the mechanical behavior of macromolecules unfolding.
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Taxonomy
TopicsForce Microscopy Techniques and Applications · thermodynamics and calorimetric analyses · Protein Structure and Dynamics
