Atomistic Simulations of Highly Conductive Molecular Transport Junctions Under Realistic Conditions
William R. French, Christopher R. Iacovella, Ivan Rungger, Amaury Melo, Souza, Stefano Sanvito, and Peter T. Cummings

TL;DR
This study uses atomistic simulations to explore how monatomic gold chains form in molecular junctions and cause conductance increases, explaining recent experimental anomalies and aiding molecular electronics development.
Contribution
It demonstrates the link between monatomic gold chain formation and conductance enhancement in molecular junctions through detailed simulations.
Findings
Large conductance increases linked to monatomic gold chains
Enhanced s-like electronic states in gold chains cause conductance rise
Monatomic chains are more stable and detectable than other transient structures
Abstract
We report state-of-the-art atomistic simulations combined with high-fidelity conductance calculations to probe structure-conductance relationships in Au-benzenedithiolate(BDT)-Au junctions under elongation. Our results demonstrate that large increases in conductance are associated with the formation of monatomic chains (MACs) of Au atoms directly connected to BDT. An analysis of the electronic structure of the simulated junctions reveals that enhancement in the s-like states in Au MACs causes the increases in conductance. Other structures also result in increased conductance but are too short-lived to be detected in experiment, while MACs remain stable for long simulation times. Examinations of thermally evolved junctions with and without MACs show negligible overlap between conductance histograms, indicating that the increase in conductance is related to this unique structural change…
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