Theoretical Aspects of Immunity

TL;DR

This paper reviews theoretical models that quantify immune system dynamics, antigen recognition, and pathogen evolution, integrating methods like bioinformatics and quantum field theory to deepen understanding of immunity.

Contribution

It synthesizes various theoretical approaches to model immune responses and pathogen co-evolution, highlighting interdisciplinary methods in immunology research.

Findings

Quantitative models of immune recognition and response.

Insights into pathogen evolution under immune pressure.

Application of advanced theoretical methods to immunology.

Abstract

The immune system recognizes a myriad of invading pathogens and their toxic products. It does so with a finite repertoire of antibodies and T cell receptors. We here describe theories that quantify the immune system dynamics. We describe how the immune system recognizes antigens by searching the large space of receptor molecules. We consider in some detail the theories that quantify the immune response to influenza and dengue fever. We review theoretical descriptions of the complementary evolution of pathogens that occurs in response to immune system pressure. Methods including bioinformatics, molecular simulation, random energy models, and quantum field theory contribute to a theoretical understanding of aspects of immunity.