Supercriticality of Annealed Approximations of Boolean Networks
Thomas Mountford, Daniel Valesin

TL;DR
This paper analyzes an annealed approximation of Boolean networks modeled as a threshold contact process on a random graph, demonstrating that activity persists exponentially long when the product of parameters exceeds one.
Contribution
It improves previous results by proving exponential persistence time of activity when the product of parameters exceeds one in the model.
Findings
Persistence time of activity is exponential in network size n when qr > 1.
The model exhibits a phase transition at qr = 1.
The analysis extends understanding of dynamics in annealed Boolean network approximations.
Abstract
We consider a model recently proposed by Chatterjee and Durrett [CD2011] as an "annealed approximation" of boolean networks, which are a class of cellular automata on a random graph, as defined by S. Kauffman [K69]. The starting point is a random directed graph on vertices; each vertex has input vertices pointing to it. For the model of [CD2011], a discrete time threshold contact process is then considered on this graph: at each instant, each vertex has probability of choosing to receive input; if it does, and if at least one of its input vertices were in state 1 at the previous instant, then it is labelled with a 1; in all other cases, it is labelled with a 0. and are kept fixed and is taken to infinity. Improving a result of [CD2011], we show that if , then the time of persistence of activity of the dynamics is exponential in .
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Taxonomy
TopicsGene Regulatory Network Analysis · Topological and Geometric Data Analysis · Slime Mold and Myxomycetes Research
