Band Alignment in Molecular Devices: Influence of Anchoring Group and Metal Work Function
Jian-guo Wang, Emil Prodan, Roberto Car, Annabella Selloni

TL;DR
This study uses density functional theory to analyze how anchoring groups and metal work functions influence band alignment in molecular junctions, revealing that the alignment depends on interface dipoles and varies with linker type and monolayer density.
Contribution
It demonstrates that band alignment in long molecular chains is independent of the link group and provides a detailed analysis of how interface dipoles affect electronic properties.
Findings
Amine linkers have large effective dipoles (~4.5 D), causing strong dependence on monolayer density.
Thiol linkers have small effective dipoles (~0.2 D), leading to rapid convergence to the isolated molecule limit.
Band alignment can be predicted from a reference system of non-interacting molecules and electrodes.
Abstract
We present periodic Density Functional Theory calculations of the electronic properties of molecular junctions formed by amine-, and thiol-terminated alkane chains attached to two metal (Au, Ag) electrodes. Based on extensive analysis that includes molecular monolayers of varying densities, we establish a relationship between the alignment of the molecular energy levels and the interface dipoles, which shows that the band alignment (BA) in the limit of long, isolated chains is independent of the link group and can be computed from a reference system of non interacting molecule + metal electrodes. The main difference between the amine and thiol linkers is the effective dipole moment at the contact. This is very large, about 4.5 D, for amine linkers, leading to a strong dependence of the BA on the monolayer density and a slow convergence to the isolated molecule limit. Instead, this…
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